Find answers to your questions about Bioinformatics or help others by answering their Bioinformatics questions.
When a DNA sequence is sequenced, I've only ever dealt with A,T,C,G and N which indicates un-identifiable bases. However, I came across a 'k' recently and I had asked another...
Asked on 12/11/2020
2 answerI am working on long read RNA sequencing. I am interested in looking whether there is any bias on shorter gene against longer genes in my data as well as...
Asked on 12/10/2020 by user3377241
0 answerI want to convert a list of fasta ( protein sequences) in a .text file into corresponding nucleotide sequences. A Google search gives me result of DNA to protein conversion...
Asked on 12/10/2020 by user3289492
3 answerI'd like to build the evolutionary history of a protein, given its sequence. Namely, given a FASTA entry how can I build an evolutionary tree? Here is...
Asked on 12/09/2020 by 0x90
2 answerI have spent some time studying RNA structures. While there is a range of interesting phenomena and functions that certainly deserve understanding from the scientific point of view, I have...
Asked on 12/09/2020
1 answerI was wondering if there was a Python program that detects convergent and divergent evolution on a tree. I am also curious if it is just better to look at...
Asked on 12/09/2020 by dasfoogle
1 answerHello to the entire Stackoverflow community!I'm writing to you because I'm currently building a phylogeny with ggtree and I have in parallel a table like this one:df :...
Asked on 12/09/2020 by chippycentra
1 answerI want to write a script that filters a pileup file from a site lists file.As an input I get a reference genome, pileup and site lists files. Example...
Asked on 12/08/2020 by Eliran Turgeman
0 answerI'm working on understanding the evolution of a gene in a phylogenetic tree. I know the rates of evolution of each organism (from the tree). I am taking a random...
Asked on 12/08/2020 by Anthony Guterres
2 answerMany large studies like TCGA use consensus clustering for transcriptional subtype identification. The most popular package for that seems to be ConsensusClusterPlus. If you want to classify an independent cohort,...
Asked on 12/06/2020
0 answerGet help from others!
Recent Answers
Recent Questions
© 2024 TransWikia.com. All rights reserved. Sites we Love: PCI Database, UKBizDB, Menu Kuliner, Sharing RPP