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I have a {maftools} plot: whatever I try to save that completely I see the down part of plot is trimmed like ...
Asked on 08/22/2021
1 answerTask: Normalize a single-cell RNA-Seq dataset to account for sequencing depth and gene-length. For UMI-count based protocols (like 10x) that don't suffer from gene-length biases, there are various methods developed...
Asked on 08/22/2021 by Bluescreen
0 answerIs there a way for me to get a list of genes given a list of SNP rs ids? I found several questions asked with a similar goal years ago,...
Asked on 08/22/2021
6 answerI am building a De Novo transcriptome reference assembly for an eukaryotic organism for which I have a genome. I've created several assemblies with rnaSpades using different kmer sizes (19...
Asked on 08/22/2021 by Pitagoras Alves
2 answerI usedape::read.GenBankand then used the functionORFik::findORFsto find ORFs in the sequence of interest. But the former one results in a DNAbin class format and the latter one requires...
Asked on 08/22/2021 by Prradep
0 answerConsider the following dataset:fictional.df <- data.frame(L1 = c(0,0,0,0,0,0,0,0), ...
Asked on 08/22/2021 by Namenlos
0 answerI am new to proteomics research and analyzing mass-spec data. I am trying to learn more about the theory/principle of TMT tagging (a type of isobaric labeling) coupled with LC-MS/MS...
Asked on 08/22/2021 by Osaama Shehzad
1 answerOur BAM files are created according to a "lossless" alignment procedure [1] from the Broad Institute GATK documenation and involves re-adding the unaligned/unmapped reads into an aligned...
Asked on 08/22/2021 by init_js
1 answerI did not find a documentation. Can Maven (mass spectrometry software) read mzML files?...
Asked on 08/22/2021 by Sören
1 answerI wanna install UBCG.JAR in ubuntu 18.04 but I cannot run the java File UBCG.JAR.when I type the code java -jar UBCG.JAR an error message appears.Exception in thread...
Asked on 08/22/2021 by Maloki
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