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All questions asked by Ashwin Geet D'Sa

List all solved & unsolved questions asked by Ashwin Geet D'Sa

What is the appropriate statistical significance test for multi-class classification?

1   Data Science Asked on 12/06/2020

multiclass classification  statistics 

Viral Metagenomics

1   Bioinformatics Asked on 11/10/2021

assembly  illumina  metagenome 

How to map short sequences to long reads, recovering all multiply-mapped high-quality matches

1   Bioinformatics Asked on 11/10/2021

alignment  dna  homework  long reads  software recommendation 

How identifiable are human omics data and how to mitigate their identifying features?

2   Bioinformatics Asked on 11/04/2021

genomics  metagenome  proteomics 

How to get transcriptome FASTA file for viruses for Kallisto pseudo-alignment?

2   Bioinformatics Asked on 10/06/2021

covid 19  kallisto  rna seq  sars cov 2  virus 

Seurat FindMarkers() output interpretation

1   Bioinformatics Asked on 10/03/2021

p values  r  scrnaseq  seurat 

How to create Phylogenetic Trees from fasta files in Python or R?

4   Bioinformatics Asked on 10/03/2021

biopython  phylogenetics  phylogeny  sequence alignment  skbio 

Help with setting DimPlot UMAP output into a 2x3 grid in Seurat

1   Bioinformatics Asked on 10/03/2021

seurat  single cell 

"How the clustal omega can be reverse engineered, to trace ancestral inversion mutations via the guide tree?"

0   Bioinformatics Asked on 10/02/2021

dna  genomics 

How to interpret UniProt allele patterns?

1   Bioinformatics Asked on 10/01/2021

file formats  phylogenetics  phylogeny  sequence alignment  uniprot 

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