Find answers to your questions about Bioinformatics or help others by answering their Bioinformatics questions.
Unlike this guy How do I find split reads? I have done a lot of reading before asking this question. I'm aware that the FLAG will tell me if...
Asked on 03/10/2021 by Liam McIntyre
0 answerWhen I run my BruteForce function with only one input it works and the result is correct.def BruteForce(s, t): occurrences = [] ...
Asked on 03/07/2021 by Beeta
2 answerIm using python and wish to get properties from each one letter amino acid? I meanM(Met) => Density:1.340, MW:149.21... The RDkit methods atom.GetSymbol(), atom.GetDegree() permit this and I am...
Asked on 03/07/2021 by MH Lee
0 answerI am now struggling to do random forest analysis, I will be thankful if you could help with code for random forest analysis. I got samples from the root, soil,...
Asked on 03/07/2021
1 answerI am trying to update the guppy_basecaller (current version installed is 3.2.10+aabd4ec) on a ONT Gridion device. I am initially trying to update it via the nanopore PPA, as...
Asked on 03/05/2021 by BCArg
1 answerA colleague is analysing RNA-seq data - the study design is 2 treatments, 3 replicates, 3 tissues. In their PCA plot the samples clustered neatly by tissue. Except for two...
Asked on 03/05/2021 by user260878
1 answerI have an assembly of an algae and want to find if it has anything analogous to endogenous retroviruses' subsequences in its DNA. My guess is I should manually blastn...
Asked on 03/04/2021
2 answerLet us suppose to have the complete CDS set of an organisms. Let us suppose to want to infer the number of chaperones involved in folding a certain subclass of...
Asked on 03/03/2021
0 answerwhen I plotting the volcano plot, I got some dots very top of the Y-axis because their padj nearly reached 0（I checked the data, I think they are reliable）, so...
Asked on 03/01/2021 by Chu
0 answerI have three conditions A, B, and C. For each state, I have gene expression data of two different tissues(liver and pancreas). I am studying the possible network/correlation/ between tissues...
Asked on 03/01/2021 by DowithR
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