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I'm interested in sequencing a sputum sample using an ONT MinION without performing any type of DNA amplification.Has anyone found a good reference (or anecdotal evidence) for a range...
Asked on 03/24/2021 by TimD1
1 answerI am currently working on a dataset that contains 50 samples (10 samples * 5 blocks). The features of the date set are:The data is perfectly balanced between blocks, with...
Asked on 03/23/2021 by Whateversclever
2 answerSuch databases have been constructed for example in here or here. But I can't find them anywhere online. Can someone point me to where...
Asked on 03/22/2021 by swa_mi
1 answerI have very large sizes tab-delimited .vcf files and want to match these two / or 3 files based on their position and print to a new .csv file...
Asked on 03/22/2021 by Nitha
1 answerI received a ddRAD Seq data from my supervisor without barcodes and restriction enzymes. I asked him for both and he said I don't need it since the data has...
Asked on 03/20/2021 by BioBash
2 answermutations = ['A222V', 'D614G', 'E484Q', 'E780Q', 'G476S', 'L18F', 'N439K', 'S477', 'S477N', 'T478I', 'V483A']combinations = []for M in...
Asked on 03/20/2021
1 answerFor proteins that have multiple chains (e.g., 1EMS), is there an easy way to specify which chain I want to use for blastp? I cannot imagine that...
Asked on 03/19/2021 by lazer-guided-lazerbeam
2 answerI have a long list of variant IDs that I generated as a result of research done one GRCh37 genomes (e.g. 13_28025615_G_C_b37). I want to get their rsIDs and compare...
Asked on 03/19/2021 by CelineDion
2 answerI had my DNA tested by Myheritage and they sent me a csv file with RSID, Chromosome, position and result (which base) with about 700,000 rows.I understand most analyses...
Asked on 03/19/2021 by user3390486
1 answerI have previously performing Allelic scoring in Plink 1.9 using: plink --score sum sumstats.txtHowever, it seems this has changed in Plink 2.0. What is the equivalent function for...
Asked on 03/17/2021
1 answerGet help from others!
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