Find answers to your questions about Bioinformatics or help others by answering their Bioinformatics questions.
If you have worked on cluster with submitting jobs, please help me in resolving the following error. I am running rsem pipeline to generate star index. In principal STAR requires...
Asked on 04/24/2021 by Angelo
0 answerI am seeking the definition of the genetic distance matrices used in genomic prediction.What is the difference between a Rodger distance and kinship matrix?what people mean when they talk about...
Asked on 04/21/2021
0 answerI am relatively new to programming and only have a basic knowledge base for R. I am keen on learning how to manipulate DNA methylation arrays for analysis related to...
Asked on 04/21/2021 by Andrew Scarborough
0 answerDeepVariant is a pipeline to call genetic variants from DNA sequencing data. A major step, before feeding the CNN, is to translate these DNA sequences into images....
Asked on 04/18/2021
2 answerI am creating a pipeline for the identification of unknown transcripts. After a local BLASTn search of the transcripts, I have a large list of the respective hits with different...
Asked on 04/18/2021 by MWP
0 answerHaving trouble finding this, not sure if the -o flag gives us this by default. Sorry if this is a silly question....
Asked on 04/16/2021
0 answerI have (gave me) Illumina fastq files and I do not know if they are DNAseq or RNAseq data. How can I check this? I do not have any report...
Asked on 04/15/2021 by Emma Athan
2 answerThis paper Fig2bb Changes of chromatin accessibility in AMD (n = 14) relative tonormal (n = 11) in all retina samples. Each dot represents oneATAC-Seq peak. Blue line in...
Asked on 04/15/2021
2 answerI am doing a functional metagenomic study. I did the annotation of protein sequences using HMMER against the Resfam database*. The publication is here...
Asked on 04/15/2021 by ahmedbar
0 answerI am trying to read a .sam file into a single string in C++. My end goal is to read this string into a vector, where tabs indicate separations between...
Asked on 04/15/2021
0 answerGet help from others!
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