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All questions asked by Steerpike

List all solved & unsolved questions asked by Steerpike

What substrate/base should I use for this small fish pond?

3   Pets Asked on 05/17/2021

fish  goldfish  pond  substrate 

How to generate Beta diversity boxplot from phyloseq object?

1   Bioinformatics Asked on 09/25/2021

statistics 

Weird phylogenetic tree

1   Bioinformatics Asked on 09/25/2021

fasta  phylogenetics  phylogeny  sequence alignment  systems biology 

How to define an outgroup to build a robust amino acid tree

2   Bioinformatics Asked on 09/25/2021

duplications  phylogenetics  phylogeny  sequence alignment 

Why does samtools mpileup sometimes include ref bases (other than ',' or '.')?

1   Bioinformatics Asked on 09/05/2021

long reads  mpileup  python  samtools 

Split fasta file based on groups in header information and output as separate files

1   Bioinformatics Asked on 09/04/2021

awk  bash  fasta  python 

Difference between genome assembly and genome sequence alignment to a reference to find structural variants

1   Bioinformatics Asked on 09/04/2021

1000genomes  alignment  assembly  structural variation  transposable elements 

Are phylogenetic tree construction algorithms any different than general clustering algorithms?

2   Bioinformatics Asked on 09/04/2021

clustering  phylogenetics  phylogeny  sequence alignment 

How to install genometools with anaconda?

2   Bioinformatics Asked on 09/03/2021

genometools 

How to implement SEG (Wootton and Federhen ,1993) algorithm?

0   Bioinformatics Asked on 09/03/2021

matlab  protein structure  python  r  sequence analysis 

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