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All questions asked by Luke Joshua Park

List all solved & unsolved questions asked by Luke Joshua Park

Why is my final docker image in this multi-stage build so large?

1   Stack Overflow Asked on 12/25/2021

docker  docker multi stage build  dockerfile  go 

Ancestry of the coronavirus 2019-nCov, WuHan city, China

1   Bioinformatics Asked on 08/29/2021

covid 19  fasta  phylogenetics  phylogeny  sequence alignment 

Alternatives to imputation for single-cell RNA-Seq analysis to increase statistical power of DE analysis

0   Bioinformatics Asked on 08/29/2021

differential expression  scrnaseq 

Prevent Snakemake from changing wildcards: sample for every rule

2   Bioinformatics Asked on 08/28/2021

snakemake 

A new paper suggests the Corona Virus has "Uncanny similarity of unique inserts in the 2019-nCoV spike protein to HIV-1" - What does this mean?

3   Bioinformatics Asked on 08/27/2021

covid 19  phylogenetics  phylogeny  sequence alignment  sequencing 

Why does the SARS-Cov2 coronavirus genome end in aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa (33 a's)?

4   Bioinformatics Asked on 08/27/2021

covid 19  fasta  phylogenetics  sequence alignment  sequencing 

Comparing aligned amino acids to codon

1   Bioinformatics Asked on 08/27/2021

r  sequence alignment 

mBED has time complexity $O(n lg n)$, claimed by Clustal Omega paper, why?

1   Bioinformatics Asked on 08/27/2021

sequence alignment 

Sequence alignment using BWT

1   Bioinformatics Asked on 08/27/2021

bwa  sequence alignment 

differential analysis of chip-seq data

3   Bioinformatics Asked on 08/26/2021

annotation  chip seq  macs2  peak calling  sequence analysis 

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