Mathematica Asked by Dale O'Brien on May 6, 2021
Bug introduced in 10.3 or earlier and persisting through 12.1.1
When all the points are the same kind, say Integer
then NearestNeighborGraph
will display a 3D graph when using {x,y,z}
coordinates. However, when just one of those points is say a Decimal
instead then one sees a 2D graph. It seems the reverse is true too. For example:
allIntegers = NearestNeighborGraph[{{0,0,0},{-1,1,1},{1,-1,1},{-1,-1,1},{1,1,1},{0,0,2},{0,0,1}},{All,2}];
allDecimals = NearestNeighborGraph[{{0.,0.,0.},{-1.,1.,1.},{1.,-1.,1.},{-1.,-1.,1.},{1.,1.,1.},{0.,0.,2.},{0.,0.,1.}},{All,2}];
oneInteger = NearestNeighborGraph[{{0,0.,0.},{-1.,1.,1.},{1.,-1.,1.},{-1.,-1.,1.},{1.,1.,1.},{0.,0.,2.},{0.,0.,1.}},{All,2}];
oneDecimal = NearestNeighborGraph[{{0.,0,0},{-1,1,1},{1,-1,1},{-1,-1,1},{1,1,1},{0,0,2},{0,0,1}},{All,2}];
Row[{allIntegers, allDecimals, oneInteger, oneDecimal}]
Displays:
Is there something I’m doing wrong or some parameter I need to pass? I’d like to be able to force 3D.
One possible workaround to this bug is to set VertexCoordinates
explicitly.
pts = {{0., 0, 0}, {-1, 1, 1}, {1, -1, 1}, {-1, -1, 1}, {1, 1, 1}, {0, 0, 2}, {0, 0, 1}};
NearestNeighborGraph[pts, {All, 2},
VertexCoordinates -> pts (* <-- workaround *)]
Correct answer by Szabolcs on May 6, 2021
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