Geographic Information Systems Asked on June 14, 2021
I have a GeoDatFrame df
:
df.geometry.name
>>>'geometry'
df.loc[:, 'geometry']
>>>
Identifiant
0 MULTIPOLYGON (((2.827 42.691, 2.828 42.691, 2....
1 MULTIPOLYGON (((2.226 48.859, 2.226 48.861, 2....
2 MULTIPOLYGON (((2.226 48.859, 2.226 48.861, 2....
3 MULTIPOLYGON (((5.556 43.188, 5.557 43.190, 5....
4 MULTIPOLYGON (((3.933 43.629, 3.933 43.629, 3....
...
2998 MULTIPOLYGON (((5.195 43.382, 5.195 43.383, 5....
2999 GEOMETRYCOLLECTION EMPTY
3000 MULTIPOLYGON (((5.015 44.060, 5.017 44.060, 5....
3001 MULTIPOLYGON (((4.913 43.824, 4.915 43.824, 4....
3002 MULTIPOLYGON (((4.740 43.925, 4.741 43.926, 4....
Name: geometry, Length: 3003, dtype: geometry
I wanted to store the table in PostGIS.
I tried :
from sqlalchemy import create_engine
engine = create_engine('my_specifications')
df.to_sql('my_name', con=engine, index=True, if_exists='replace')
>>> AttributeError: 'GeometryDtype' object has no attribute 'base'
Since I could not find a solution I tried to save the GeoDataFrame as a shapefile with the following :
df.to_file('my_file.shp')
>>> TypeError: data type not understood
I searched a way to convert my geometry
column to WKT format but it failed since I am working with MultiPolygon.
if not possible :
EDIT 1 :
I want to know how to successfully move my GeoDataFrame to PostGIS.
EDIT 2:
As mentioned in the comments, I tried to save the dataframe as a geopackage with :
df.to_file("test.gpkg", driver="GPKG")
>>>TypeError: data type not understood
How can I save the GeoDataFrame and keep rows which have no geometries ?
EDIT 3:
I tried to understand what the different geometry types were, here is what I get :
df1.loc[df1.geometry.map(lambda x: x.geom_type)=='GeometryCollection', 'geom']
>>>
Index
15 ()
16 ()
19 ()
20 ()
21 ()
..
2989 ()
2990 ()
2991 ()
2993 ()
2999 ()
I also tried what @BERA suggested :
df1 = df[df.geometry.map(lambda x: x.geom_type)=='MultiPolygon']
df1.geometry.geom_type.unique()
>>> array(['MultiPolygon'], dtype=object)
df1.to_file("test.shp")
>>>
---------------------------------------------------------------------------
TypeError Traceback (most recent call last)
<ipython-input-73-e3cc1dfd7764> in <module>
1 os.chdir(r'Z:SUNR_POWER5_Business DevelopmentVeille marchéConcurrence6 - Lauréats CRE2 - Cartographie')
----> 2 df2.to_file("test.shp")
~Anaconda3libsite-packagesgeopandasgeodataframe.py in to_file(self, filename, driver, schema, **kwargs)
502 from geopandas.io.file import to_file
503
--> 504 to_file(self, filename, driver, schema, **kwargs)
505
506 def to_crs(self, crs=None, epsg=None, inplace=False):
~Anaconda3libsite-packagesgeopandasiofile.py in to_file(df, filename, driver, schema, **kwargs)
123 """
124 if schema is None:
--> 125 schema = infer_schema(df)
126 with fiona_env():
127 with fiona.open(
~Anaconda3libsite-packagesgeopandasiofile.py in infer_schema(df)
157 [
158 (col, convert_type(col, _type))
--> 159 for col, _type in zip(df.columns, df.dtypes)
160 if col != df._geometry_column_name
161 ]
~Anaconda3libsite-packagesgeopandasiofile.py in <listcomp>(.0)
158 (col, convert_type(col, _type))
159 for col, _type in zip(df.columns, df.dtypes)
--> 160 if col != df._geometry_column_name
161 ]
162 )
~Anaconda3libsite-packagesgeopandasiofile.py in convert_type(column, in_type)
143 # numpy datetime type regardless of frequency
144 return "datetime"
--> 145 out_type = type(np.zeros(1, in_type).item()).__name__
146 if out_type == "long":
147 out_type = "int"
TypeError: data type not understood
I get the same error if I wanted to save my GeoDataFrame
to a GeoPackage.
Try to specify your datatype.
df.to_sql('my_name', con=engine, index=True, if_exists='replace', dtype=({'geometry':'geometry'}))
Answered by GStav on June 14, 2021
########### writing data to ESRI shapefile
#############################################################################
########## change if any column has data as date/time type to string
########## as, shapefile does not support datetime datatype #################
gdf_final['forecast_date']=gdf_final['forecast_date'].astype(str)
##### write the shapefile using geopandas as #################
shape_file_name='outfile.shp'
gdf_final.to_file(shape_file_name)
prjname_m='outfile.prj'
prj_m = open(prjname_m, "w")
epsg="GEOGCS["+"GCS_WGS_1984"+",DATUM["+"D_WGS_1984"+",SPHEROID["+"WGS_1984"+",6378137.0,298.257223563]],PRIMEM["+"Greenwich"+",0.0],UNIT["+"Degree"+",0.0174532925199433]]"
prj_m.write(epsg)
prj_m.close()
Answered by Abhilash Singh Chauhan on June 14, 2021
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