Extract pixel values of NetCDF and save them as CSV

You can try using rioxarray & xarray:

• Clip: https://corteva.github.io/rioxarray/stable/examples/clip_geom.html
• Clip Box: https://corteva.github.io/rioxarray/stable/examples/clip_box.html
• NetCDF to CSV: https://gis.stackexchange.com/a/358057/144357

If you are able to provide a file, a more targeted example could be given.

EDIT: In case you have lon 0-360, these links should help:

• https://github.com/corteva/rioxarray/issues/58#issuecomment-612062722
• https://gis.stackexchange.com/a/357810/144357

Based on this comment from the moderators:

Your questions should as much as possible describe not just what you want to do, but precisely what you have tried and where you are stuck trying that.

Mind attempting to come up with a solution based on the links referenced here and adding code you have attempted and any errors you have run into to the question?