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GitLab keeps loading and finally fails when deploying a dockerized node.js app

DevOps Asked by Alireza on August 22, 2021

GitLab Job Log

[0KRunning with gitlab-runner 13.2.0-rc2 (45f2b4ec)
[0;m[0K  on docker-auto-scale fa6cab46
[0;msection_start:1595233272:prepare_executor
[0K[0K[36;1mPreparing the "docker+machine" executor[0;m
[0;m[0KUsing Docker executor with image gitlab/dind:latest ...
[0;m[0KStarting service docker:dind ...
[0;m[0KPulling docker image docker:dind ...
[0;m[0KUsing docker image sha256:d5d139be840a6ffa04348fc87740e8c095cade6e9cb977785fdba51e5fd7ffec for docker:dind ...
[0;m[0KWaiting for services to be up and running...
[0;m
[0;33m*** WARNING:[0;m Service runner-fa6cab46-project-18378289-concurrent-0-31a688551619da9f-docker-0 probably didn't start properly.

Health check error:
service "runner-fa6cab46-project-18378289-concurrent-0-31a688551619da9f-docker-0-wait-for-service" timeout

Health check container logs:


Service container logs:
2020-07-20T08:21:19.734721788Z time="2020-07-20T08:21:19.734543379Z" level=info msg="Starting up"
2020-07-20T08:21:19.742928068Z time="2020-07-20T08:21:19.742802844Z" level=warning msg="could not change group /var/run/docker.sock to docker: group docker not found"
2020-07-20T08:21:19.743943014Z time="2020-07-20T08:21:19.743853574Z" level=warning msg="[!] DON'T BIND ON ANY IP ADDRESS WITHOUT setting --tlsverify IF YOU DON'T KNOW WHAT YOU'RE DOING [!]"
2020-07-20T08:21:19.764021012Z time="2020-07-20T08:21:19.763898078Z" level=info msg="libcontainerd: started new containerd process" pid=23
2020-07-20T08:21:19.764159337Z time="2020-07-20T08:21:19.764107864Z" level=info msg="parsed scheme: "unix"" module=grpc
2020-07-20T08:21:19.764207629Z time="2020-07-20T08:21:19.764179926Z" level=info msg="scheme "unix" not registered, fallback to default scheme" module=grpc
2020-07-20T08:21:19.764319635Z time="2020-07-20T08:21:19.764279612Z" level=info msg="ccResolverWrapper: sending update to cc: {[{unix:///var/run/docker/containerd/containerd.sock 0  <nil>}] <nil>}" module=grpc
2020-07-20T08:21:19.764371375Z time="2020-07-20T08:21:19.764344798Z" level=info msg="ClientConn switching balancer to "pick_first"" module=grpc
2020-07-20T08:21:19.969344247Z time="2020-07-20T08:21:19.969193121Z" level=info msg="starting containerd" revision=7ad184331fa3e55e52b890ea95e65ba581ae3429 version=v1.2.13 
2020-07-20T08:21:19.969863044Z time="2020-07-20T08:21:19.969784495Z" level=info msg="loading plugin "io.containerd.content.v1.content"..." type=io.containerd.content.v1 
2020-07-20T08:21:19.970042302Z time="2020-07-20T08:21:19.969997665Z" level=info msg="loading plugin "io.containerd.snapshotter.v1.btrfs"..." type=io.containerd.snapshotter.v1 
2020-07-20T08:21:19.970399514Z time="2020-07-20T08:21:19.970336671Z" level=warning msg="failed to load plugin io.containerd.snapshotter.v1.btrfs" error="path /var/lib/docker/containerd/daemon/io.containerd.snapshotter.v1.btrfs must be a btrfs filesystem to be used with the btrfs snapshotter" 
2020-07-20T08:21:19.970474776Z time="2020-07-20T08:21:19.970428684Z" level=info msg="loading plugin "io.containerd.snapshotter.v1.aufs"..." type=io.containerd.snapshotter.v1 
2020-07-20T08:21:20.019585153Z time="2020-07-20T08:21:20.019421401Z" level=warning msg="failed to load plugin io.containerd.snapshotter.v1.aufs" error="modprobe aufs failed: "ip: can't find device 'aufs'nmodprobe: can't change directory to '/lib/modules': No such file or directoryn": exit status 1" 
2020-07-20T08:21:20.019709540Z time="2020-07-20T08:21:20.019668899Z" level=info msg="loading plugin "io.containerd.snapshotter.v1.native"..." type=io.containerd.snapshotter.v1 
2020-07-20T08:21:20.019934319Z time="2020-07-20T08:21:20.019887606Z" level=info msg="loading plugin "io.containerd.snapshotter.v1.overlayfs"..." type=io.containerd.snapshotter.v1 
2020-07-20T08:21:20.020299876Z time="2020-07-20T08:21:20.020218529Z" level=info msg="loading plugin "io.containerd.snapshotter.v1.zfs"..." type=io.containerd.snapshotter.v1 
2020-07-20T08:21:20.021038477Z time="2020-07-20T08:21:20.020887571Z" level=info msg="skip loading plugin "io.containerd.snapshotter.v1.zfs"..." type=io.containerd.snapshotter.v1 
2020-07-20T08:21:20.021162370Z time="2020-07-20T08:21:20.021121663Z" level=info msg="loading plugin "io.containerd.metadata.v1.bolt"..." type=io.containerd.metadata.v1 
2020-07-20T08:21:20.021406797Z time="2020-07-20T08:21:20.021348536Z" level=warning msg="could not use snapshotter aufs in metadata plugin" error="modprobe aufs failed: "ip: can't find device 'aufs'nmodprobe: can't change directory to '/lib/modules': No such file or directoryn": exit status 1" 
2020-07-20T08:21:20.021487917Z time="2020-07-20T08:21:20.021435946Z" level=warning msg="could not use snapshotter zfs in metadata plugin" error="path /var/lib/docker/containerd/daemon/io.containerd.snapshotter.v1.zfs must be a zfs filesystem to be used with the zfs snapshotter: skip plugin" 
2020-07-20T08:21:20.021581245Z time="2020-07-20T08:21:20.021533539Z" level=warning msg="could not use snapshotter btrfs in metadata plugin" error="path /var/lib/docker/containerd/daemon/io.containerd.snapshotter.v1.btrfs must be a btrfs filesystem to be used with the btrfs snapshotter" 
2020-07-20T08:21:20.030531741Z time="2020-07-20T08:21:20.030427430Z" level=info msg="loading plugin "io.containerd.differ.v1.walking"..." type=io.containerd.differ.v1 
2020-07-20T08:21:20.030639854Z time="2020-07-20T08:21:20.030604536Z" level=info msg="loading plugin "io.containerd.gc.v1.scheduler"..." type=io.containerd.gc.v1 
2020-07-20T08:21:20.030779501Z time="2020-07-20T08:21:20.030736875Z" level=info msg="loading plugin "io.containerd.service.v1.containers-service"..." type=io.containerd.service.v1 
2020-07-20T08:21:20.030865060Z time="2020-07-20T08:21:20.030833703Z" level=info msg="loading plugin "io.containerd.service.v1.content-service"..." type=io.containerd.service.v1 
2020-07-20T08:21:20.030955439Z time="2020-07-20T08:21:20.030912981Z" level=info msg="loading plugin "io.containerd.service.v1.diff-service"..." type=io.containerd.service.v1 
2020-07-20T08:21:20.031027842Z time="2020-07-20T08:21:20.030998003Z" level=info msg="loading plugin "io.containerd.service.v1.images-service"..." type=io.containerd.service.v1 
2020-07-20T08:21:20.031132325Z time="2020-07-20T08:21:20.031083782Z" level=info msg="loading plugin "io.containerd.service.v1.leases-service"..." type=io.containerd.service.v1 
2020-07-20T08:21:20.031202966Z time="2020-07-20T08:21:20.031174445Z" level=info msg="loading plugin "io.containerd.service.v1.namespaces-service"..." type=io.containerd.service.v1 
2020-07-20T08:21:20.031286993Z time="2020-07-20T08:21:20.031253528Z" level=info msg="loading plugin "io.containerd.service.v1.snapshots-service"..." type=io.containerd.service.v1 
2020-07-20T08:21:20.031370557Z time="2020-07-20T08:21:20.031312376Z" level=info msg="loading plugin "io.containerd.runtime.v1.linux"..." type=io.containerd.runtime.v1 
2020-07-20T08:21:20.031709756Z time="2020-07-20T08:21:20.031650044Z" level=info msg="loading plugin "io.containerd.runtime.v2.task"..." type=io.containerd.runtime.v2 
2020-07-20T08:21:20.031941868Z time="2020-07-20T08:21:20.031897088Z" level=info msg="loading plugin "io.containerd.monitor.v1.cgroups"..." type=io.containerd.monitor.v1 
2020-07-20T08:21:20.032929781Z time="2020-07-20T08:21:20.032846588Z" level=info msg="loading plugin "io.containerd.service.v1.tasks-service"..." type=io.containerd.service.v1 
2020-07-20T08:21:20.033064279Z time="2020-07-20T08:21:20.033014391Z" level=info msg="loading plugin "io.containerd.internal.v1.restart"..." type=io.containerd.internal.v1 
2020-07-20T08:21:20.034207198Z time="2020-07-20T08:21:20.034120505Z" level=info msg="loading plugin "io.containerd.grpc.v1.containers"..." type=io.containerd.grpc.v1 
2020-07-20T08:21:20.034316027Z time="2020-07-20T08:21:20.034279582Z" level=info msg="loading plugin "io.containerd.grpc.v1.content"..." type=io.containerd.grpc.v1 
2020-07-20T08:21:20.034402334Z time="2020-07-20T08:21:20.034369239Z" level=info msg="loading plugin "io.containerd.grpc.v1.diff"..." type=io.containerd.grpc.v1 
2020-07-20T08:21:20.034482782Z time="2020-07-20T08:21:20.034452282Z" level=info msg="loading plugin "io.containerd.grpc.v1.events"..." type=io.containerd.grpc.v1 
2020-07-20T08:21:20.034564724Z time="2020-07-20T08:21:20.034533365Z" level=info msg="loading plugin "io.containerd.grpc.v1.healthcheck"..." type=io.containerd.grpc.v1 
2020-07-20T08:21:20.034645756Z time="2020-07-20T08:21:20.034617060Z" level=info msg="loading plugin "io.containerd.grpc.v1.images"..." type=io.containerd.grpc.v1 
2020-07-20T08:21:20.034722695Z time="2020-07-20T08:21:20.034689037Z" level=info msg="loading plugin "io.containerd.grpc.v1.leases"..." type=io.containerd.grpc.v1 
2020-07-20T08:21:20.034800005Z time="2020-07-20T08:21:20.034770572Z" level=info msg="loading plugin "io.containerd.grpc.v1.namespaces"..." type=io.containerd.grpc.v1 
2020-07-20T08:21:20.034873069Z time="2020-07-20T08:21:20.034837050Z" level=info msg="loading plugin "io.containerd.internal.v1.opt"..." type=io.containerd.internal.v1 
2020-07-20T08:21:20.036608424Z time="2020-07-20T08:21:20.036525701Z" level=info msg="loading plugin "io.containerd.grpc.v1.snapshots"..." type=io.containerd.grpc.v1 
2020-07-20T08:21:20.036722927Z time="2020-07-20T08:21:20.036684403Z" level=info msg="loading plugin "io.containerd.grpc.v1.tasks"..." type=io.containerd.grpc.v1 
2020-07-20T08:21:20.036799326Z time="2020-07-20T08:21:20.036769392Z" level=info msg="loading plugin "io.containerd.grpc.v1.version"..." type=io.containerd.grpc.v1 
2020-07-20T08:21:20.036876692Z time="2020-07-20T08:21:20.036844684Z" level=info msg="loading plugin "io.containerd.grpc.v1.introspection"..." type=io.containerd.grpc.v1 
2020-07-20T08:21:20.037291381Z time="2020-07-20T08:21:20.037244979Z" level=info msg=serving... address="/var/run/docker/containerd/containerd-debug.sock" 
2020-07-20T08:21:20.037493736Z time="2020-07-20T08:21:20.037445814Z" level=info msg=serving... address="/var/run/docker/containerd/containerd.sock" 
2020-07-20T08:21:20.037563487Z time="2020-07-20T08:21:20.037522305Z" level=info msg="containerd successfully booted in 0.069638s" 
2020-07-20T08:21:20.087933162Z time="2020-07-20T08:21:20.087804902Z" level=info msg="Setting the storage driver from the $DOCKER_DRIVER environment variable (overlay2)"
2020-07-20T08:21:20.088415387Z time="2020-07-20T08:21:20.088327506Z" level=info msg="parsed scheme: "unix"" module=grpc
2020-07-20T08:21:20.088533804Z time="2020-07-20T08:21:20.088465157Z" level=info msg="scheme "unix" not registered, fallback to default scheme" module=grpc
2020-07-20T08:21:20.088620947Z time="2020-07-20T08:21:20.088562235Z" level=info msg="ccResolverWrapper: sending update to cc: {[{unix:///var/run/docker/containerd/containerd.sock 0  <nil>}] <nil>}" module=grpc
2020-07-20T08:21:20.088709546Z time="2020-07-20T08:21:20.088654016Z" level=info msg="ClientConn switching balancer to "pick_first"" module=grpc
2020-07-20T08:21:20.092857445Z time="2020-07-20T08:21:20.092749940Z" level=info msg="parsed scheme: "unix"" module=grpc
2020-07-20T08:21:20.092962469Z time="2020-07-20T08:21:20.092914347Z" level=info msg="scheme "unix" not registered, fallback to default scheme" module=grpc
2020-07-20T08:21:20.093060327Z time="2020-07-20T08:21:20.093013905Z" level=info msg="ccResolverWrapper: sending update to cc: {[{unix:///var/run/docker/containerd/containerd.sock 0  <nil>}] <nil>}" module=grpc
2020-07-20T08:21:20.093142744Z time="2020-07-20T08:21:20.093102173Z" level=info msg="ClientConn switching balancer to "pick_first"" module=grpc
2020-07-20T08:21:20.149109416Z time="2020-07-20T08:21:20.148965236Z" level=info msg="Loading containers: start."
2020-07-20T08:21:20.159351905Z time="2020-07-20T08:21:20.159146135Z" level=warning msg="Running modprobe bridge br_netfilter failed with message: ip: can't find device 'bridge'nbridge                167936  1 br_netfilternstp                    16384  1 bridgenllc                    16384  2 bridge,stpnip: can't find device 'br_netfilter'nbr_netfilter           24576  0 nbridge                167936  1 br_netfilternmodprobe: can't change directory to '/lib/modules': No such file or directoryn, error: exit status 1"
2020-07-20T08:21:20.280536391Z time="2020-07-20T08:21:20.280402152Z" level=info msg="Default bridge (docker0) is assigned with an IP address 172.18.0.0/16. Daemon option --bip can be used to set a preferred IP address"
2020-07-20T08:21:20.337028532Z time="2020-07-20T08:21:20.336889956Z" level=info msg="Loading containers: done."
2020-07-20T08:21:20.435200532Z time="2020-07-20T08:21:20.435033092Z" level=info msg="Docker daemon" commit=48a66213fe graphdriver(s)=overlay2 version=19.03.12
2020-07-20T08:21:20.436386855Z time="2020-07-20T08:21:20.436266338Z" level=info msg="Daemon has completed initialization"
2020-07-20T08:21:20.476621441Z time="2020-07-20T08:21:20.475137317Z" level=info msg="API listen on [::]:2375"
2020-07-20T08:21:20.477679219Z time="2020-07-20T08:21:20.477535808Z" level=info msg="API listen on /var/run/docker.sock"

[0;33m*********[0;m

[0KPulling docker image gitlab/dind:latest ...
[0;m[0KUsing docker image sha256:cc674e878f23bdc3c36cc37596d31adaa23bca0fc3ed18bea9b59abc638602e1 for gitlab/dind:latest ...
[0;msection_end:1595233326:prepare_executor
[0Ksection_start:1595233326:prepare_script
[0K[0K[36;1mPreparing environment[0;m
[0;mRunning on runner-fa6cab46-project-18378289-concurrent-0 via runner-fa6cab46-srm-1595233216-1bd30100...
section_end:1595233330:prepare_script
[0Ksection_start:1595233330:get_sources
[0K[0K[36;1mGetting source from Git repository[0;m
[0;m[32;1m$ eval "$CI_PRE_CLONE_SCRIPT"[0;m
[32;1mFetching changes with git depth set to 50...[0;m
Initialized empty Git repository in /builds/xxx.us/backend/.git/
[32;1mCreated fresh repository.[0;m
[32;1mChecking out 257ffdf2 as stage...[0;m

[32;1mSkipping Git submodules setup[0;m
section_end:1595233333:get_sources
[0Ksection_start:1595233333:restore_cache
[0K[0K[36;1mRestoring cache[0;m
[0;m[32;1mChecking cache for stage node:14.5.0-alpine-2...[0;m
Downloading cache.zip from https://storage.googleapis.com/gitlab-com-runners-cache/project/18378289/stage%20node:14.5.0-alpine-2[0;m 
[32;1mSuccessfully extracted cache[0;m
section_end:1595233334:restore_cache
[0Ksection_start:1595233334:step_script
[0K[0K[36;1mExecuting "step_script" stage of the job script[0;m
[0;mln: failed to create symbolic link '/sys/fs/cgroup/systemd/name=systemd': Operation not permitted
time="2020-07-20T08:22:14.844844859Z" level=warning msg="[!] DON'T BIND ON ANY IP ADDRESS WITHOUT setting -tlsverify IF YOU DON'T KNOW WHAT YOU'RE DOING [!]" 
time="2020-07-20T08:22:14.846663310Z" level=info msg="libcontainerd: new containerd process, pid: 57" 
time="2020-07-20T08:22:14.906788853Z" level=info msg="Graph migration to content-addressability took 0.00 seconds" 
time="2020-07-20T08:22:14.907996055Z" level=info msg="Loading containers: start." 
time="2020-07-20T08:22:14.910877638Z" level=warning msg="Running modprobe bridge br_netfilter failed with message: modprobe: ERROR: ../libkmod/libkmod.c:556 kmod_search_moddep() could not open moddep file '/lib/modules/4.19.78-coreos/modules.dep.bin'nmodprobe: ERROR: ../libkmod/libkmod.c:556 kmod_search_moddep() could not open moddep file '/lib/modules/4.19.78-coreos/modules.dep.bin'n, error: exit status 1" 
time="2020-07-20T08:22:14.912665866Z" level=warning msg="Running modprobe nf_nat failed with message: `modprobe: ERROR: ../libkmod/libkmod.c:556 kmod_search_moddep() could not open moddep file '/lib/modules/4.19.78-coreos/modules.dep.bin'`, error: exit status 1" 
time="2020-07-20T08:22:14.914201302Z" level=warning msg="Running modprobe xt_conntrack failed with message: `modprobe: ERROR: ../libkmod/libkmod.c:556 kmod_search_moddep() could not open moddep file '/lib/modules/4.19.78-coreos/modules.dep.bin'`, error: exit status 1" 
time="2020-07-20T08:22:14.989456423Z" level=warning msg="Could not load necessary modules for IPSEC rules: Running modprobe xfrm_user failed with message: `modprobe: ERROR: ../libkmod/libkmod.c:556 kmod_search_moddep() could not open moddep file '/lib/modules/4.19.78-coreos/modules.dep.bin'`, error: exit status 1" 
time="2020-07-20T08:22:14.990108153Z" level=info msg="Default bridge (docker0) is assigned with an IP address 172.18.0.0/16. Daemon option --bip can be used to set a preferred IP address" 

time="2020-07-20T08:22:15.029286773Z" level=info msg="Loading containers: done." 
time="2020-07-20T08:22:15.029664106Z" level=info msg="Daemon has completed initialization" 
time="2020-07-20T08:22:15.029823541Z" level=info msg="Docker daemon" commit=23cf638 graphdriver=overlay2 version=1.12.1 
time="2020-07-20T08:22:15.048665494Z" level=info msg="API listen on /var/run/docker.sock" 
time="2020-07-20T08:22:15.049046558Z" level=info msg="API listen on [::]:7070" 

# Keeps loading and finally fails after a couple of seconds

gitlab-ci.yml

cache:
  key: '$CI_COMMIT_REF_NAME node:14.5.0-alpine'
  paths:
    - node_modules/

stages:
  - release
  - deploy

variables:
  TAGGED_IMAGE: '$CI_REGISTRY_IMAGE:latest'

.release:
  stage: release
  image: docker:19.03.12
  services:
    - docker:dind
  variables:
    DOCKER_DRIVER: overlay2
    DOCKER_BUILDKIT: 1
  before_script:
    - docker version
    - docker info
    - echo "$CI_JOB_TOKEN" | docker login --username $CI_REGISTRY_USER --password-stdin $CI_REGISTRY
  script:
    - docker build --pull --tag $TAGGED_IMAGE --cache-from $TAGGED_IMAGE --build-arg NODE_ENV=$CI_ENVIRONMENT_NAME .
    - docker push $TAGGED_IMAGE
  after_script:
    - docker logout $CI_REGISTRY

.deploy:
  stage: deploy
  image: gitlab/dind:latest
  services:
    - docker:dind
  variables:
    DOCKER_COMPOSE_PATH: '~/docker-composes/$CI_PROJECT_PATH/docker-compose.yml'
  before_script:
    - 'which ssh-agent || ( apt-get update -y && apt-get install openssh-client -y )'
    - eval $(ssh-agent -s)
    - echo "$DEPLOY_SERVER_PRIVATE_KEY" | tr -d 'r' | ssh-add -
    - mkdir -p ~/.ssh
    - chmod 700 ~/.ssh
    - ssh-keyscan $DEPLOYMENT_SERVER_IP >> ~/.ssh/known_hosts
    - chmod 644 ~/.ssh/known_hosts
  script:
    - rsync -avR --rsync-path="mkdir -p ~/docker-composes/$CI_PROJECT_PATH/; rsync" ./docker-compose.yml root@$DEPLOYMENT_SERVER_IP:~/docker-composes/$CI_PROJECT_PATH/
    - ssh root@$DEPLOYMENT_SERVER_IP "echo "$CI_REGISTRY_PASSWORD" | docker login --username $CI_REGISTRY_USER --password-stdin $CI_REGISTRY; docker-compose -f $DOCKER_COMPOSE_PATH rm -f -s -v $CI_COMMIT_REF_NAME; docker pull $TAGGED_IMAGE; docker-compose -f $DOCKER_COMPOSE_PATH up -d $CI_COMMIT_REF_NAME;"

release_stage:
  extends: .release
  only:
    - stage
  environment:
    name: staging

deploy_stage:
  extends: .deploy
  only:
    - stage
  environment:
    name: staging

Dockerfile

ARG NODE_ENV

FROM node:14.5.0-alpine

ARG NODE_ENV

ENV NODE_ENV ${NODE_ENV}

# Set working directory
WORKDIR /var/www/

# Install app dependencies
COPY package.json package-lock.json ./
RUN npm ci --silent --only=production

COPY . ./

# Start the application
CMD [ "npm", "run", "start" ]

docker-compose.yml

version: '3.8'

services:
  redis-stage:
    container_name: redis-stage
    image: redis:6.0.5-alpine
    ports:
      - '7075:6379'
    restart: always
    networks:
      - my-proxy-net

  stage:
    container_name: xxx-backend-stage
    image: registry.gitlab.com/xxx.us/backend:latest
    build: .
    expose:
      - '7070'
    restart: always
    networks:
      - my-proxy-net
    depends_on:
      - redis-stage
    environment:
      VIRTUAL_HOST: backend.xxx.us
      VIRTUAL_PROTO: https
      LETSENCRYPT_HOST: backend.xxx.us

networks:
  my-proxy-net:
    external:
      name: mynetwork

Update 1

I got a warning on the page claims I have used over 30% of my shared runner minutes. Maybe it is about not having enough minutes.

Update 2

The release stage gets completed successfully.

Update 3

Before I get into this problem, I deployed once successfully. I decided to test that commit once again and see if it succeeds, but it fails!

One Answer

I fixed the issue. In my case, it was PORT (absolutely) and HOST (maybe) environment variables I defined manually in the GitLab CI/CD Variables section. It seems PORT and maybe HOST are two reserved environment variables for GitLab and/or Docker.

By the way, I couldn't find anything in docs state not using those variables names.

Answered by Alireza on August 22, 2021

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