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COVID: How is the R coefficient calculated?

Data Science Asked by RadiantHex on April 19, 2021

I’m having a hard time trying to figure out what the formula for estimating R is.

I assume it’s a coefficient used in some sort of regression type?

If that is the case is it an exponential, logarithmic or another type of regression from which I extrapolate this coefficient?

Thanks, hope someone can help this ignoramous 🙂

One Answer

This article provides a good explanation.

Realistic models are much more complicated, but the basic ideas are:

$R_0$ is the basic reproductive number. If you put an infected individual in a population that is fully susceptible to the disease, then that individual is expected to infect $R_0$ people.

$R_t$ is the effective reproductive number (same as $R_e$). People include the subscript to distinguish $R_t$ from $R_0$ because $R$ is ambiguous. In a population $P$ at time $t$, an infected individual causes $R_t$ new infections on average. Therefore, given the susceptible population $Ssubseteq P$ (i.e. the people who are not immune at time $t$), we have $R_t=R_0frac{|S|}{|P|}$. Again, the actual $R_t$ is affected by many other factors, but if we only considered $R_0$ and the fraction of susceptible people in a population at a given time, then this is the interpretation of $R_t$.

Therefore, the growth ($R_t>1$) or decay ($R_t<1$) in the number of cases is exponential.


For live updates on COVID $R_t$ values in the US per state, you can check out: https://rt.live

Answered by Benji Albert on April 19, 2021

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