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Generating 3D coordinates error

Bioinformatics Asked by Shahbaaz on January 15, 2021

I have been trying to convert a multi entry sdf file to pdb using openbabel. Everytime I check the Generate 3D coordinates box I end up with .ENT files instead of .PDB files. What am I doing wrong.

Thank you.

One Answer

An ent file is a pdb file. Just change the extension. PDBe for example provides their PDB files as such.

Answered by Matteo Ferla on January 15, 2021

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