DNA sequence error annotation

Suppose I generate a DNA sequence of the following pattern.

AAGTC

And after being passed through a channel with insertion, deletion and substitution errors obtain the following sequence

AAAGGC

Where there was an insertion error in the first position, second position and deletion in the third position and no error in the final position.

I currently know the error pattern but is there a way to automatically identify the error patterns and annotate them?