Incapacitating Dahl Quest

Towards the end of the game, you can incapacitate Dahl instead of outright killing him. This opens up an option to leave the station, as well as allow for any crew members you’ve saved to leave.

I’m a little confused on the events here. I went with the following ending, so keep this in mind:

The quest for incapacitating Dahl sticks around for most of the endgame stuff, and for me it was sitting on “wait for Dahl’s signal to leave” or something like that. However, at no time during the ending sequences did the quest update for me to leave that way. I noticed during the ending cutscene that a shuttle did leave Talos 1, but the quest just stuck around in that waiting state until the very end. Did I miss some other queues, or based on the ending I chose, is this intentional?