Adding height values in QGIS using v.to.3d

I am trying to create a 3d map in QGIS 3.12.3 using v.to.3d, I have Grass installed and have Height values stored in the attribute table of the ‘Habitats [EPSG:4326]’ layer I am trying to make 3d. When I run this through v.to.3d this is the response I receive:

QGIS version: 3.12.3-București
QGIS code revision: 8234261527
Qt version: 5.11.2
GDAL version: 3.0.4
GEOS version: 3.8.1-CAPI-1.13.3
PROJ version: Rel. 6.3.2, May 1st, 2020
Processing algorithm…
Algorithm 'v.to.3d' starting…
Input parameters:
{ '-r' : False, '-t' : False, 'GRASS_MIN_AREA_PARAMETER' : 0.0001, 'GRASS_OUTPUT_TYPE_PARAMETER' : 0, 'GRASS_REGION_PARAMETER' : None, 'GRASS_SNAP_TOLERANCE_PARAMETER' : -1, 'GRASS_VECTOR_DSCO' : '', 'GRASS_VECTOR_EXPORT_NOCAT' : False, 'GRASS_VECTOR_LCO' : '', 'column' : 'Height', 'height' : None, 'input' : 'C:/Users/user/Desktop/LakeProject/Habitats.shp', 'output' : 'TEMPORARY_OUTPUT', 'type' : [0,1,2,3] }

g.proj -c proj4="+proj=longlat +datum=WGS84 +no_defs"
v.in.ogr min_area=0.0001 snap=-1.0 input="C:UsersuserDesktopLakeProjectHabitats.shp" output="vector_6064c1b33c0b88" --overwrite -o
g.region n=37.78757493408765 s=37.786860653618696 e=-122.46628277404538 w=-122.46736208177902
v.to.3d input=vector_6064c1b33c0b88 type="point,line,boundary,centroid" column=Height output=output44f423749e334146bd0b61f2bd3c9837 --overwrite
v.out.ogr type="auto" input="output44f423749e334146bd0b61f2bd3c9837" output="C:UsersuserAppDataLocalTempprocessing_avIvGR36287ea21bc449d8ac1e2a6646b5a83output.gpkg" format="GPKG" --overwrite
The system cannot find the file C:rtools40Version.txt.
Starting GRASS GIS...
WARNING: Concurrent mapset locking is not supported on Windows
Cleaning up temporary files...
Executing <C:UsersuserAppDataLocalTempprocessing_avIvGRgrassdatagrass_batch_job.cmd> ...
C:UsersuserDocuments>chcp 1252 1>NUL
C:UsersuserDocuments>g.proj -c proj4="+proj=longlat +datum=WGS84 +no_defs"
Default region was updated to the new projection, but if you have multiple mapsets `g.region -d` should be run in each to update the region from the default
Projection information updated
C:UsersuserDocuments>v.in.ogr min_area=0.0001 snap=-1.0 input="C:UsersuserDesktopLakeProjectHabitats.shp" output="vector_6064c1b33c0b88" --overwrite -o
Over-riding projection check
Check if OGR layer <Habitats> contains polygons...
0..3..5..7..9..12..14..16..18..20..23..25..27..29..32..34..36..38..40..43..45..47..49..52..54..56..58..60..63..65..67..69..72..74..76..78..80..83..85..87..89..92..94..96..98..100
Creating attribute table for layer <Habitats>...
Column name <Common nam> renamed to <Common_nam>
Column name <Species na> renamed to <Species_na>
Column name <Native?> renamed to <Native_>
Importing 55 features (OGR layer <Habitats>)...
0..3..5..7..9..12..14..16..18..20..23..25..27..29..32..34..36..38..40..43..45..47..49..52..54..56..58..60..63..65..67..69..72..74..76..78..80..83..85..87..89..92..94..96..98..100
-----------------------------------------------------
Registering primitives...
-----------------------------------------------------
Cleaning polygons
-----------------------------------------------------
Breaking polygons...
Breaking polygons (pass 1: select break points)...
1..3..5..7..10..12..14..17..19..21..24..26..28..31..33..35..38..40..42..45..47..49..52..54..56..59..61..63..66..68..70..73..75..77..80..82..84..87..89..91..94..96..98..100
Breaking polygons (pass 2: break at selected points)...
1..3..5..7..10..12..14..17..19..21..24..26..28..31..33..35..38..40..42..45..47..49..52..54..56..59..61..63..66..68..70..73..75..77..80..82..84..87..89..91..94..96..98..100
-----------------------------------------------------
Removing duplicates...
1..3..5..7..9..11..13..15..17..19..21..23..25..27..29..31..33..35..37..39..41..43..45..47..49..51..53..55..57..59..61..63..65..67..69..71..73..75..77..79..81..83..85..87..89..91..93..95..97..99..100
-----------------------------------------------------
Breaking boundaries...
0..2..4..6..8..10..12..14..16..18..20..22..24..26..28..30..32..34..36..38..40..42..44..46..48..50..52..54..56..58..60..62..64..66..68..70..72..74..76..78..80..82..84..86..88..90..92..94..96..98..100
-----------------------------------------------------
Removing duplicates...
1..3..5..7..9..11..13..15..17..19..21..23..25..27..29..31..33..35..37..39..41..43..45..47..49..51..53..55..57..59..61..63..65..67..69..71..73..75..77..79..81..83..85..87..89..91..93..95..97..99..100
-----------------------------------------------------
Cleaning boundaries at nodes...
1..3..5..7..9..11..13..15..17..19..21..23..25..27..29..31..33..35..37..39..41..43..45..47..49..51..53..55..57..59..61..63..65..67..69..71..73..75..77..79..81..83..85..87..89..91..93..95..97..99..100
-----------------------------------------------------
Breaking boundaries...
0..2..4..6..8..10..12..14..16..18..20..22..24..26..28..30..32..34..36..38..40..42..44..46..48..50..52..54..56..58..60..62..64..66..68..70..72..74..76..78..80..82..84..86..88..90..92..94..96..98..100
-----------------------------------------------------
Removing duplicates...
1..3..5..7..9..11..13..15..17..19..21..23..25..27..29..31..33..35..37..39..41..43..45..47..49..51..53..55..57..59..61..63..65..67..69..71..73..75..77..79..81..83..85..87..89..91..93..95..97..99..100
-----------------------------------------------------
Cleaning boundaries at nodes...
1..3..5..7..9..11..13..15..17..19..21..23..25..27..29..31..33..35..37..39..41..43..45..47..49..51..53..55..57..59..61..63..65..67..69..71..73..75..77..79..81..83..85..87..89..91..93..95..97..99..100
-----------------------------------------------------
Merging boundaries...
2..5..8..11..14..17..20..23..26..29..32..35..38..41..44..47..50..53..56..59..62..65..68..71..74..77..80..83..86..89..92..95..98..100
-----------------------------------------------------
Removing dangles...
1..3..5..7..9..11..13..15..17..19..21..23..25..27..29..31..33..35..37..39..41..43..45..47..49..51..53..55..57..59..61..63..65..67..69..71..73..75..77..79..81..83..85..87..89..91..93..95..97..99..100
-----------------------------------------------------
Building areas...
0..2..4..6..8..10..12..14..16..18..20..22..24..26..28..30..32..34..36..-----------------------------------------------------
Removing bridges...
38..40..42..44..46..48..50..52..54..56..58..60..62..64..66..68..70..72..74..76..78..80..82..84..86..88..90..92..94..96..98..100
-----------------------------------------------------
Registering primitives...
Building areas...
0..2..4..6..8..10..12..14..16..18..20..22..24..26..28..30..32..34..36..38..40..42..44..46..48..50..52..54..56..58..60..62..64..66..68..70..72..74..76..78..80..82..84..86..88..90..92..94..96..98..100
Attaching islands...
0..25..50..75..100
-----------------------------------------------------
Finding centroids for OGR layer <Habitats>...
0..3..7..10..14..18..21..25..29..32..36..40..43..47..50..54..58..61..65..69..72..76..80..83..87..90..94..98..100
-----------------------------------------------------
Writing centroids...
2..5..8..11..14..17..20..23..26..29..32..35..38..41..44..47..50..53..56..59..62..65..68..71..74..77..80..83..86..89..92..95..98..100
-----------------------------------------------------
56 input polygons
Total area: 3101.68 (100 areas)
Overlapping area: 5.079 (28 areas)
Area without category: 0.487711 (15 areas)
-----------------------------------------------------
Copying features...
2..5..8..11..14..17..20..23..26..29..32..35..38..41..44..47..50..53..56..59..62..65..68..71..74..77..80..83..86..89..92..95..98..100
Building topology for vector map <vector_6064c1b33c0b88@PERMANENT>...
Registering primitives...
Building areas...
0..2..4..6..8..10..12..14..16..18..20..22..24..26..28..30..32..34..36..38..40..42..44..46..48..50..52..54..56..58..60..62..64..66..68..70..72..74..76..78..80..82..84..86..88..90..92..94..96..98..100
Attaching islands...
0..25..50..75..100
Attaching centroids...
0..2..4..7..9..11..14..16..18..20..22..24..27..29..31..34..36..38..40..42..44..47..49..51..54..56..58..60..62..64..67..69..71..74..76..78..80..82..84..87..89..91..94..96..98..100
-----------------------------------------------------
28 areas represent multiple (overlapping) features, because polygons overlap in input layer(s). Such areas are linked to more than 1 row in attribute table. The number of features for those areas is stored as category in layer 2
-----------------------------------------------------
If overlapping is not desired, the input data can be cleaned by snapping vertices to each other.
Estimated range of snapping threshold: [1e-013, 0.0001]
C:UsersuserDocuments>g.region n=37.78757493408765 s=37.786860653618696 e=-122.46628277404538 w=-122.46736208177902
C:UsersuserDocuments>v.to.3d input=vector_6064c1b33c0b88 type="point,line,boundary,centroid" column=Height output=output44f423749e334146bd0b61f2bd3c9837 --overwrite
Fetching height from <Height> column...
Transforming features...
Copying attributes...
Building topology for vector map <output44f423749e334146bd0b61f2bd3c9837@PERMANENT>...
Registering primitives...
WARNING: Number of centroids exceeds number of areas: 85 > 0
WARNING: Number of centroids outside area: 85
Vertical extent of vector map <output44f423749e334146bd0b61f2bd3c9837>: B: 1.000000 T: 200.000000
C:UsersuserDocuments>v.out.ogr type="auto" input="output44f423749e334146bd0b61f2bd3c9837" output="C:UsersuserAppDataLocalTempprocessing_avIvGR36287ea21bc449d8ac1e2a6646b5a83output.gpkg" format="GPKG" --overwrite
WARNING: Unable to determine input map's vector feature type(s).
WARNING: 85 centroids found, but not requested to be exported. Verify 'type' parameter.
WARNING: Vector map <output44f423749e334146bd0b61f2bd3c9837> is 3D. Use format specific layer creation options (parameter 'lco') to export <in 3D rather than 2D (default).
WARNING: Output layer is empty, no features written
v.out.ogr complete. 0 features (Unknown (any) type) written to <output44f423749e334146bd0b61f2bd3c9837> (GPKG format).
C:UsersuserDocuments>exit
Execution of <C:UsersuserAppDataLocalTempprocessing_avIvGRgrassdatagrass_batch_job.cmd> finished.
Cleaning up default sqlite database ...
Cleaning up temporary files...
ERROR: Variable 'LOCATION_NAME' not set
Execution completed in 7.55 seconds
Results:
{'output': <QgsProcessingOutputLayerDefinition {'sink':TEMPORARY_OUTPUT, 'createOptions': {'fileEncoding': 'System'}}>}

Loading resulting layers
Algorithm 'v.to.3d' finished

I tried ‘setzvalue‘ and ran this through ‘v.to.3d‘. This also did not work. This is the response:

QGIS code revision: 8234261527
Qt version: 5.11.2
GDAL version: 3.0.4
GEOS version: 3.8.1-CAPI-1.13.3
PROJ version: Rel. 6.3.2, May 1st, 2020
Processing algorithm…
Algorithm 'v.to.3d' starting…
Input parameters:
{ '-r' : False, '-t' : False, 'GRASS_MIN_AREA_PARAMETER' : 0.0001, 'GRASS_OUTPUT_TYPE_PARAMETER' : 0, 'GRASS_REGION_PARAMETER' : None, 'GRASS_SNAP_TOLERANCE_PARAMETER' : -1, 'GRASS_VECTOR_DSCO' : '', 'GRASS_VECTOR_EXPORT_NOCAT' : False, 'GRASS_VECTOR_LCO' : '', 'column' : 'Height', 'height' : None, 'input' : 'MultiPolygonZ?crs=EPSG:4326&field=Common%20nam:string(80,0)&field=Type:string(80,0)&field=Family:string(80,0)&field=Species%20na:string(80,0)&field=Native%3F:string(80,0)&field=Count:integer(9,0)&field=area:double(10,3)&field=Height:integer(9,0)&uid={b1fe6523-b273-4151-a591-eab708491441}', 'output' : 'TEMPORARY_OUTPUT', 'type' : [0,1,2,3] }

g.proj -c proj4="+proj=longlat +datum=WGS84 +no_defs"
v.in.ogr min_area=0.0001 snap=-1.0 input="C:UsersuserAppDataLocalTempprocessing_avIvGR9f7b0bb10dfa41caa5e1af9b3b58d710input.shp" output="vector_6064c16a802c47" --overwrite -o
g.region n=37.78757493408765 s=37.786860653618696 e=-122.46628277404538 w=-122.46736208177902
v.to.3d input=vector_6064c16a802c47 type="point,line,boundary,centroid" column=Height output=outputb2265b6f9e1246a3a2a4af54327fd670 --overwrite
v.out.ogr type="auto" input="outputb2265b6f9e1246a3a2a4af54327fd670" output="C:UsersuserAppDataLocalTempprocessing_avIvGR35a2a43d3c87434ba77218f43b130b9coutput.gpkg" format="GPKG" --overwrite
The system cannot find the file C:rtools40Version.txt.
Starting GRASS GIS...
WARNING: Concurrent mapset locking is not supported on Windows
Cleaning up temporary files...
Executing <C:UsersuserAppDataLocalTempprocessing_avIvGRgrassdatagrass_batch_job.cmd> ...
C:UsersuserDocuments>chcp 1252 1>NUL
C:UsersuserDocuments>g.proj -c proj4="+proj=longlat +datum=WGS84 +no_defs"
Default region was updated to the new projection, but if you have multiple mapsets `g.region -d` should be run in each to update the region from the default
Projection information updated
C:UsersuserDocuments>v.in.ogr min_area=0.0001 snap=-1.0 input="C:UsersuserAppDataLocalTempprocessing_avIvGR9f7b0bb10dfa41caa5e1af9b3b58d710input.shp" output="vector_6064c16a802c47" --overwrite -o
Over-riding projection check
Check if OGR layer <input> contains polygons...
0..3..5..7..9..12..14..16..18..20..23..25..27..29..32..34..36..38..40..43..45..47..49..52..54..56..58..60..63..65..67..69..72..74..76..78..80..83..85..87..89..92..94..96..98..100
Creating attribute table for layer <input>...
Column name <Common nam> renamed to <Common_nam>
Column name <Species na> renamed to <Species_na>
Column name <Native?> renamed to <Native_>
Importing 55 features (OGR layer <input>)...
0..3..5..7..9..12..14..16..18..20..23..25..27..29..32..34..36..38..40..43..45..47..49..52..54..56..58..60..63..65..67..69..72..74..76..78..80..83..85..87..89..92..94..96..98..100
-----------------------------------------------------
Registering primitives...
-----------------------------------------------------
Cleaning polygons
-----------------------------------------------------
Breaking polygons...
Breaking polygons (pass 1: select break points)...
1..3..5..7..10..12..14..17..19..21..24..26..28..31..33..35..38..40..42..45..47..49..52..54..56..59..61..63..66..68..70..73..75..77..80..82..84..87..89..91..94..96..98..100
Breaking polygons (pass 2: break at selected points)...
1..3..5..7..10..12..14..17..19..21..24..26..28..31..33..35..38..40..42..45..47..49..52..54..56..59..61..63..66..68..70..73..75..77..80..82..84..87..89..91..94..96..98..100
-----------------------------------------------------
Removing duplicates...
1..3..5..7..9..11..13..15..17..19..21..23..25..27..29..31..33..35..37..39..41..43..45..47..49..51..53..55..57..59..61..63..65..67..69..71..73..75..77..79..81..83..85..87..89..91..93..95..97..99..100
-----------------------------------------------------
Breaking boundaries...
0..2..4..6..8..10..12..14..16..18..20..22..24..26..28..30..32..34..36..38..40..42..44..46..48..50..52..54..56..58..60..62..64..66..68..70..72..74..76..78..80..82..84..86..88..90..92..94..96..98..100
-----------------------------------------------------
Removing duplicates...
1..3..5..7..9..11..13..15..17..19..21..23..25..27..29..31..33..35..37..39..41..43..45..47..49..51..53..55..57..59..61..63..65..67..69..71..73..75..77..79..81..83..85..87..89..91..93..95..97..99..100
-----------------------------------------------------
Cleaning boundaries at nodes...
1..3..5..7..9..11..13..15..17..19..21..23..25..27..29..31..33..35..37..39..41..43..45..47..49..51..53..55..57..59..61..63..65..67..69..71..73..75..77..79..81..83..85..87..89..91..93..95..97..99..100
-----------------------------------------------------
Breaking boundaries...
0..2..4..6..8..10..12..14..16..18..20..22..24..26..28..30..32..34..36..38..40..42..44..46..48..50..52..54..56..58..60..62..64..66..68..70..72..74..76..78..80..82..84..86..88..90..92..94..96..98..100
-----------------------------------------------------
Removing duplicates...
1..3..5..7..9..11..13..15..17..19..21..23..25..27..29..31..33..35..37..39..41..43..45..47..49..51..53..55..57..59..61..63..65..67..69..71..73..75..77..79..81..83..85..87..89..91..93..95..97..99..100
-----------------------------------------------------
Cleaning boundaries at nodes...
1..3..5..7..9..11..13..15..17..19..21..23..25..27..29..31..33..35..37..39..41..43..45..47..49..51..53..55..57..59..61..63..65..67..69..71..73..75..77..79..81..83..85..87..89..91..93..95..97..99..100
-----------------------------------------------------
Breaking boundaries...
0..2..4..6..8..10..12..14..16..18..20..22..24..26..28..30..32..34..36..38..40..42..44..46..48..50..52..54..56..58..60..62..64..66..68..70..72..74..76..78..80..82..84..86..88..90..92..94..96..98..100
-----------------------------------------------------
Removing duplicates...
1..3..5..7..9..11..13..15..17..19..21..23..25..27..29..31..33..35..37..39..41..43..45..47..49..51..53..55..57..59..61..63..65..67..69..71..73..75..77..79..81..83..85..87..89..91..93..95..97..99..100
-----------------------------------------------------
Cleaning boundaries at nodes...
1..3..5..7..9..11..13..15..17..19..21..23..25..27..29..31..33..35..37..39..41..43..45..47..49..51..53..55..57..59..61..63..65..67..69..71..73..75..77..79..81..83..85..87..89..91..93..95..97..99..100
-----------------------------------------------------
Merging boundaries...
2..5..8..11..14..17..20..23..26..29..32..35..38..41..44..47..50..53..56..59..62..65..68..71..74..77..80..83..86..89..92..95..98..100
-----------------------------------------------------
Removing dangles...
1..3..5..7..9..11..13..15..17..19..21..23..25..27..29..31..33..35..37..39..41..43..45..47..49..51..53..55..57..59..61..63..65..67..69..71..73..75..77..79..81..83..85..87..89..91..93..95..97..99..100
-----------------------------------------------------
Building areas...
0..2..4..6..8..10..12..14..16..18..20..22..24..26..28..30..32..34..36..38..40..42..44..46..48..WARNING: Number of incorrect boundaries: 117
-----------------------------------------------------
Removing bridges...
50..52..54..56..58..60..62..64..66..68..70..72..74..76..78..80..82..84..86..88..90..92..94..96..98..100
-----------------------------------------------------
Registering primitives...
Building areas...
0..2..4..6..8..10..12..14..16..18..20..22..24..26..28..30..32..34..36..38..40..42..44..46..48..50..52..54..56..58..60..62..64..66..68..70..72..74..76..78..80..82..84..86..88..90..92..94..96..98..100
WARNING: Number of incorrect boundaries: 415
-----------------------------------------------------
Finding centroids for OGR layer <input>...
0..3..7..10..14..18..21..25..29..32..36..40..43..47..50..54..58..61..65..69..72..76..80..83..87..90..94..98..100
-----------------------------------------------------
Writing centroids...
33..66..100
-----------------------------------------------------
56 input polygons
Total area: 55.1933 (3 areas)
Area without category: 0.0278723 (1 areas)
-----------------------------------------------------
Copying features...
2..5..8..11..14..17..20..23..26..29..32..35..38..41..44..47..50..53..56..59..62..65..68..71..74..77..80..83..86..89..92..95..98..100
Building topology for vector map <vector_6064c16a802c47@PERMANENT>...
Registering primitives...
Building areas...
0..2..4..6..8..10..12..14..16..18..20..22..24..26..28..30..32..34..36..38..40..42..44..46..48..50..52..54..56..58..60..62..64..66..68..70..72..74..76..78..80..82..84..86..88..90..92..94..96..98..100
Attaching islands...
0..25..50..75..100
Attaching centroids...
0..50..100
WARNING: Number of incorrect boundaries: 117
-----------------------------------------------------
WARNING: The output contains topological errors:
Number of incorrect boundaries: 117
The input could be cleaned by snapping vertices to each other.
Estimated range of snapping threshold: [1e-013, 0.0001]
Try to import again, snapping with 1e-009: 'snap=1e-009'
C:UsersuserDocuments>g.region n=37.78757493408765 s=37.786860653618696 e=-122.46628277404538 w=-122.46736208177902
C:UsersuserDocuments>v.to.3d input=vector_6064c16a802c47 type="point,line,boundary,centroid" column=Height output=outputb2265b6f9e1246a3a2a4af54327fd670 --overwrite
ERROR: Vector map <vector_6064c16a802c47> is 3D
C:UsersuserDocuments>v.out.ogr type="auto" input="outputb2265b6f9e1246a3a2a4af54327fd670" output="C:UsersuserAppDataLocalTempprocessing_avIvGR35a2a43d3c87434ba77218f43b130b9coutput.gpkg" format="GPKG" --overwrite
ERROR: Vector map <outputb2265b6f9e1246a3a2a4af54327fd670> not found
C:UsersuserDocuments>exit
Execution of <C:UsersuserAppDataLocalTempprocessing_avIvGRgrassdatagrass_batch_job.cmd> finished.
Cleaning up default sqlite database ...
Cleaning up temporary files...
Press any key to continue . . .
Execution completed in 7.08 seconds
Results:
{'output': <QgsProcessingOutputLayerDefinition {'sink':TEMPORARY_OUTPUT, 'createOptions': {'fileEncoding': 'System'}}>}

Loading resulting layers
The following layers were not correctly generated.<ul><li>C:/Users/user/AppData/Local/Temp/processing_avIvGR/35a2a43d3c87434ba77218f43b130b9c/output.gpkg</li></ul>You can check the 'Log Messages Panel'

I receive two very different responses.